Description

Computes the irmsd score for a given alignment and the structures.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, … ]

msa:file

Multiple Sequence Alignment File

meta2:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

template:file

Template file

structures:file

Structure file

Output

name:type
description
pattern

irmsd

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

${prefix}.irmsd:file

File containing the irmsd of the alignment

*

versions

versions.yml:file

File containing software versions

versions.yml

Tools

pigz

Parallel implementation of the gzip algorithm.