Parses a Thermo RAW file containing mass spectra to an open file format
meta:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
raw:file
Thermo RAW file
*.{raw,RAW}
spectra
*.{mzML,mzML.gz,mgf,mgf.gz,parquet,parquet.gz}:file
Mass spectra in open format
*.{mzML,mzML.gz,mgf,mgf.gz,parquet,parquet.gz}
versions
versions.yml:file
File containing software versions
versions.yml
Wrapper around the .net (C#) ThermoFisher ThermoRawFileReader library for running on Linux with mono
