Description

Plots telomeric repeat frequency against sliding window location using data produced by tidk/search

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

tsv:file

Search results in TSV format from tidk search

*.tsv

Output

name:type
description
pattern

svg

meta:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

*.svg:file

Telomere search plot

*.svg

versions

versions.yml:file

File containing software versions

versions.yml

Tools

tidk
MIT

tidk is a toolkit to identify and visualise telomeric repeats in genomes