Searches a genome for a telomere string such as TTAGGG
meta
:map
Groovy Map containing sample information e.g. [ id:'sample1' ]
[ id:'sample1' ]
fasta
:file
The input fasta file
*.{fsa,fa,fasta}
string
:string
Search string such as TTAGGG
tsv
*.tsv
Search results in TSV format
bedgraph
*.bedgraph
Search results in BEDGRAPH format
versions_tidk
${task.process}
The name of the process
tidk
The name of the tool
tidk --version | sed 's/tidk //'
:eval
The expression to obtain the version of the tool
versions
tidk is a toolkit to identify and visualise telomeric repeats in genomes
