Assembles a de novo transcriptome from RNAseq reads
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads:file
List of input fasta/fastq reads to be assembled into a transcriptome.
*.{fa,fasta,fq,fastq}
transcript_fasta
*.fa.gz:file
de novo assembled transcripts fasta file compressed
*.fa.gz
log
*.log:file
Log from trinity
*.log
versions
versions.yml:file
File containing software versions
versions.yml
Trinity assembles transcript sequences from Illumina RNA-Seq data.
