Description

Over multiple vcfs, calculate their intersection/consistency.

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

vcfs{:bash}

:file

two or more VCF files to compare

*.{vcf,gz}

Output

name:type
description
pattern

consistency{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

*.{txt,json}{:bash}

:file

Output report in txt or json format

*.{txt,json}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml