Description

Normalization of SVs into disjointed genomic regions

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:'sample1']

vcf

:file

Input VCF file

*.{vcf,gz}

Output

name:type
description
pattern

vcf

meta

:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

*.vcf

:file

Segmented VCF file

*.{vcf}

versions_truvari

${task.process}

:string

The process the versions were collected from

truvari

:string

The name of the tool

truvari version | sed 's/Truvari v//'

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The process the versions were collected from

truvari

:string

The name of the tool

truvari version | sed 's/Truvari v//'

:eval

The expression to obtain the version of the tool