Subsample a long-read sequencing fastq file for multiple assemblies
meta:map
Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]
[ id:'sample1', single_end:false ]
reads:file
Long-read FASTQ file, optionally gzip compressed
subreads
*/*.fastq.gz:file
Subsampled read sets
*.{fastq.gz}
versions
versions.yml:file
File containing software versions
versions.yml
Trycycler is a tool for generating consensus long-read assemblies for bacterial genomes
