Description

compute average score of bigwig over bed file

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

bed:file

bed file

*.{bed}

bigwig:file

bigwig file

*.{bigwig,bw}

Output

name:type
description
pattern

tab

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.tab:file

tab file

*.{tab}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

ucsc
varies; see http://genome.ucsc.edu/license

Compute average score of big wig over each bed, which may have introns.