Description

compute average score of bigwig over bed file

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

bed{:bash}

:file

bed file

*.{bed}

bigwig{:bash}

:file

bigwig file

*.{bigwig,bw}

Output

name:type
description
pattern

tab{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.tab{:bash}

:file

tab file

*.{tab}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

ucsc
varies; see http://genome.ucsc.edu/license

Compute average score of big wig over each bed, which may have introns.