Description

Convert ascii format wig file to binary big wig format

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

wig{:bash}

:file

wig file

*.{wig}

sizes{:bash}

:file

Chromosome sizes file

Output

name:type
description
pattern

bw{:bash}

meta{:bash}

:file

bigwig file

*.{bw}

*.bw{:bash}

:file

bigwig file

*.{bw}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

ucsc
varies; see http://genome.ucsc.edu/license

Convert ascii format wig file (in fixedStep, variableStep or bedGraph format) to binary big wig format