Description

Convert ascii format wig file to binary big wig format

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

wig (file)

wig file

*.{wig}

chromsizes (file)

chromosome sizes file

Output

Name (Type)
Description
Pattern

versions (file)

File containing software versions

versions.yml

bw (file)

bigwig file

*.{bw}
included in
hicar raredisease
maintainers
Github user jianhong
Github user projectoriented
get in touch
Ask a question on Slack Open an issue on GitHub

Tools

ucsc
varies; see http://genome.ucsc.edu/license

Convert ascii format wig file (in fixedStep, variableStep or bedGraph format) to binary big wig format

http://www.genome.ucsc.edu/goldenPath/help/bigWig