uLTRA aligner - A wrapper around minimap2 to improve small exon detection
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
reads
:file
A fasta or fastq file of reads to align
*.{fasta,fastq}
meta2
fasta
fasta file of reference genome
*.fasta
meta3
gtf
Genome annotation file
*.gtf
sam
*.sam
The aligned reads in sam format
versions_ultra
${task.process}
:string
The name of the process
ultra
The name of the tool
uLTRA --version | sed 's/uLTRA //'
:eval
The expression to obtain the version of the tool
versions
Splice aligner of long transcriptomic reads to genome.
