uLTRA aligner - A wrapper around minimap2 to improve small exon detection
meta:map
Groovy Map containing sample information e.g. [ id:‘test’ ]
reads:file
A fasta or fastq file of reads to align
*.{fasta,fastq}
meta2:map
fasta:file
fasta file of reference genome
*.fasta
meta3:map
gtf:file
Genome annotation file
*.gtf
sam
*.sam:file
The aligned reads in sam format
*.sam
versions
versions.yml:file
File containing software versions
versions.yml
Splice aligner of long transcriptomic reads to genome.
