Ultraplex is an all-in-one software package for processing and demultiplexing fastq files.
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads{:bash}
:file
FASTQ file(s) to demultiplex
barcode_file{:bash}
FASTQ file containing barcode sequences
fastq{:bash}
*[!no_match].fastq.gz
*_matched.fastq.gz{:bash}
no_match_fastq{:bash}
*_no_match_*.fastq.gz{:bash}
*no_match.fastq.gz
report{:bash}
*.log{:bash}
File containing demultiplexing log
*.log
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
fastq demultiplexer
