Ultraplex is an all-in-one software package for processing and demultiplexing fastq files.
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
reads
:file
FASTQ file(s) to demultiplex
barcode_file
FASTQ file containing barcode sequences
fastq
*[!no_match].fastq.gz
*_matched.fastq.gz
no_match_fastq
*_no_match_*.fastq.gz
*no_match.fastq.gz
report
*.log
File containing demultiplexing log
versions_ultraplex
${task.process}
:string
The name of the process
ultraplex
The name of the tool
1.2.9
The expression to obtain the version of the tool
versions
fastq demultiplexer
