Ultraplex is an all-in-one software package for processing and demultiplexing fastq files.
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
reads:file
FASTQ file(s) to demultiplex
barcode_file:file
FASTQ file containing barcode sequences
fastq
*[!no_match].fastq.gz
*_matched.fastq.gz:map
no_match_fastq
*no_match.fastq.gz
*_no_match_*.fastq.gz:map
report
*.log:file
File containing demultiplexing log
*.log
versions
versions.yml:file
File containing software versions
versions.yml
fastq demultiplexer
