Make the output from umi_tools dedup or group compatible with RSEM
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
bam:file
BAM file containing reads to be deduplicated via UMIs.
*.{bam}
bai:file
BAM index files corresponding to the input BAM file.
*.{bai}
bam
*.bam:file
Prepared BAM file.
log
*.log:file
File with logging information
*.{log}
versions
versions.yml:file
File containing software versions
versions.yml
UMI-tools contains tools for dealing with Unique Molecular Identifiers (UMIs)/Random Molecular Tags (RMTs) and single cell RNA-Seq cell barcodes
