Description

Simple software to call UPD regions from germline exome/wgs trios.

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

vcf{:bash}

:file

VCF file

*.{vcf,vcf.gz}

Output

name:type
description
pattern

bed{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.bed{:bash}

:file

BED file

*.{bed}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

upd
MIT

Simple software to call UPD regions from germline exome/wgs trios.