Description

Simple software to call UPD regions from germline exome/wgs trios.

Input

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

vcf (file)

VCF file

*.{vcf,vcf.gz}

Output

Name (Type)
Description
Pattern

meta (map)

Groovy Map containing sample information
e.g. [ id:‘test’, single_end

]

versions (file)

File containing software versions

versions.yml

bed (file)

BED file

*.{bed}
included in
raredisease
maintainer
Github user hrydbeck
get in touch
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Tools

upd
MIT

Simple software to call UPD regions from germline exome/wgs trios.

github.com/bjhall/upd