Description

Simple software to call UPD regions from germline exome/wgs trios.

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

vcf:file

VCF file

*.{vcf,vcf.gz}

Output

name:type
description
pattern

bed

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

*.bed:file

BED file

*.{bed}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

upd
MIT

Simple software to call UPD regions from germline exome/wgs trios.