Simple software to call UPD regions from germline exome/wgs trios.
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
vcf
:file
VCF file
*.{vcf,vcf.gz}
bed
*.bed
BED file
*.{bed}
versions_upd
${task.process}
:string
The name of the process
upd
The name of the tool
upd --version 2>&1 | sed 's/upd, version //'
:eval
The expression to obtain the version of the tool
versions
