modules/variancepartition_dream
Runs a differential expression analysis with dream() from variancePartition R package
rnaseqdreamvariancepartition
Input
name:type
description
pattern
Groovy Map containing run and contrast information. This can be used at the
workflow level to pass optional parameters to the module, e.g.
[
contrast_id: ‘treatment_mCherry_hND6’,
contrast_variable: ‘treatment’,
contrast_reference: ‘mCherry’,
contrast_target: ‘hND6’,
formula: ’~ treatment + (1 | sample_number)’
]
Plus mandatory id and other fields created along the run.
