Description
Constructs a graph from a reference and variant calls or a multiple sequence alignment file
Input
Name (Type)
Description
Pattern
Either one or more VCF files containing different contigs or a multiple sequence alignment file
*.{vcf.gz,fa,fasta,fna,clustal}
A FASTA file containing insertion sequences (referred to in the VCF file(s))
*.{fa,fasta,fna}
The reference FASTA file (cannot be used in combination with msa, but is required when using vcfs)
*.{fa,fasta,fna}
