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meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
input:list
One or more input graph files created with vg/construct
vg/construct
*.vg
xg
*.xg:file
File containing a succint, queryable version of the input graph(s) or read for GCSA or distance indexing
*.xg
vg_index
*.vgi:file
An index of the graph(s) created when --index-sorted-vg is supplied.
--index-sorted-vg
*.vgi
versions
versions.yml:file
File containing software versions
versions.yml
Variation graph data structures, interchange formats, alignment, genotyping, and variant calling methods.
