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:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
input
:list
One or more input graph files created with vg/construct
vg/construct
*.vg
xg
*.xg
:file
File containing a succinct, queryable version of the input graph(s) or read for GCSA or distance indexing
vg_index
*.vgi
An index of the graph(s) created when --index-sorted-vg is supplied.
--index-sorted-vg
versions_vg
${task.process}
:string
The name of the process
vg
The name of the tool
vg 2>&1 | sed -n 's/.*version v\([0-9.]*\).*/\1/p'
:eval
The expression to obtain the version of the tool
versions
Variation graph data structures, interchange formats, alignment, genotyping, and variant calling methods.
