Description

simulating sequence reads from a reference genome

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

fasta:file

Genome fasta file

*.{fa,fasta}

Output

name:type
description
pattern

fastq

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.fastq:file

Simulated FASTQ read files

*.{fastq}

versions

versions.yml:file

File containing software versions

versions.yml

Tools

wgsim
MIT

simulating sequence reads from a reference genome