Description

Returns the gender of a .npz resulting from convert, based on a Gaussian mixture model trained during the newref phase

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

npz:file

Single sample NPZ file (from which to determine the gender)

*.npz

meta2:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

reference:file

Reference NPZ file

*.npz

Output

name:type
description
pattern

gender

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end

]

versions

versions.yml:file

File containing software versions

versions.yml

Tools

wisecondorx
Attribution-NonCommercial-ShareAlike CC BY-NC-SA

WIthin-SamplE COpy Number aberration DetectOR, including sex chromosomes