Description

Create a new reference using healthy reference samples

Input

name:type
description
pattern

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

inputs

:file

Multiple NPZ files from healthy patients

*.{npz}

Output

name:type
description
pattern

npz

meta

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.npz

:file

The reference NPZ file

*.{npz}

versions_wisecondorx

${task.process}

:string

The name of the process

wisecondorx

:string

The name of the tool

pip list |& sed -n 's/wisecondorx *//p'

:eval

The expression to obtain the version of the tool

Topics

name:type
description
pattern

versions

${task.process}

:string

The name of the process

wisecondorx

:string

The name of the tool

pip list |& sed -n 's/wisecondorx *//p'

:eval

The expression to obtain the version of the tool

Tools

wisecondorx
Attribution-NonCommercial-ShareAlike CC BY-NC-SA

WIthin-SamplE COpy Number aberration DetectOR, including sex chromosomes