Description

Builds a YARA index for a reference genome

Input

name:type
description
pattern

meta:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

fasta:file

Input genome fasta file

Output

name:type
description
pattern

index

meta:file

YARA genome index files

yara.*

${fasta}*:file

YARA genome index files

yara.*

versions

versions.yml:file

File containing software versions

versions.yml

Tools

yara
https://raw.githubusercontent.com/seqan/seqan/develop/apps/yara/LICENSE

Yara is an exact tool for aligning DNA sequencing reads to reference genomes.