nf-core/pangenome

Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.

pangenome

These pages are for an old version of the pipeline (1.1.1). The latest stable release is 1.1.2 .

Launch version 1.1.1 https://github.com/nf-core/pangenome

Name Last Modified Size

FINAL_GFA/ FINAL_ODGI/ extract_communities/ gfaffix/ multiqc/ net2communities/ odgi_build/ odgi_draw/ odgi_layout/ odgi_stats/ odgi_unchop/ odgi_viz/ paf2net/ pipeline_info/ samtools_faidx/ scerevisiae8.fasta.gz.community.0_multiqc/ scerevisiae8.fasta.gz.community.10_multiqc/ scerevisiae8.fasta.gz.community.11_multiqc/ scerevisiae8.fasta.gz.community.12_multiqc/ scerevisiae8.fasta.gz.community.13_multiqc/ scerevisiae8.fasta.gz.community.14_multiqc/ scerevisiae8.fasta.gz.community.15_multiqc/ scerevisiae8.fasta.gz.community.16_multiqc/ scerevisiae8.fasta.gz.community.1_multiqc/ scerevisiae8.fasta.gz.community.2_multiqc/ scerevisiae8.fasta.gz.community.3_multiqc/ scerevisiae8.fasta.gz.community.4_multiqc/ scerevisiae8.fasta.gz.community.5_multiqc/ scerevisiae8.fasta.gz.community.6_multiqc/ scerevisiae8.fasta.gz.community.7_multiqc/ scerevisiae8.fasta.gz.community.8_multiqc/ scerevisiae8.fasta.gz.community.9_multiqc/ seqwish/ smoothxg/ tabix_bgzip/ wfmash/ wfmash_map_community/