nf-core/riboseq

Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.

Launch version 1.2.0 https://github.com/nf-core/riboseq

Name Last Modified Size

alignment/ genome/ multiqc/ offset_plot/ orf_predictions/ other/ pipeline_info/ preprocessing/ quantification/ riboseq_qc/ ribowaltz_qc/ translational_efficiency/

SRX11780885.best_offset.txt

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SRX11780885.cds_coverage_psite.tsv.gz

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SRX11780885.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780885.codon_coverage_psite.tsv.gz

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SRX11780885.codon_coverage_rpf.tsv.gz

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SRX11780885.psite.tsv.gz

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SRX11780885.psite_offset.tsv.gz

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SRX11780886.best_offset.txt

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SRX11780886.cds_coverage_psite.tsv.gz

about 1 month 609 kB

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SRX11780886.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780886.codon_coverage_psite.tsv.gz

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SRX11780886.codon_coverage_rpf.tsv.gz

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SRX11780886.psite.tsv.gz

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SRX11780886.psite_offset.tsv.gz

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SRX11780887.best_offset.txt

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SRX11780887.cds_coverage_psite.tsv.gz

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SRX11780887.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780887.codon_coverage_psite.tsv.gz

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SRX11780887.codon_coverage_rpf.tsv.gz

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SRX11780887.psite.tsv.gz

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SRX11780887.psite_offset.tsv.gz

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SRX11780888.best_offset.txt

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SRX11780888.cds_coverage_psite.tsv.gz

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SRX11780888.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780888.codon_coverage_psite.tsv.gz

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SRX11780888.codon_coverage_rpf.tsv.gz

about 1 month 693 MB

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SRX11780888.psite.tsv.gz

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SRX11780888.psite_offset.tsv.gz

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SRX11780889.best_offset.txt

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SRX11780889.cds_coverage_psite.tsv.gz

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SRX11780889.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780889.codon_coverage_psite.tsv.gz

about 1 month 687 MB

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SRX11780889.codon_coverage_rpf.tsv.gz

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SRX11780889.psite.tsv.gz

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SRX11780889.psite_offset.tsv.gz

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SRX11780890.best_offset.txt

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SRX11780890.cds_coverage_psite.tsv.gz

about 1 month 609 kB

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SRX11780890.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

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SRX11780890.codon_coverage_psite.tsv.gz

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SRX11780890.codon_coverage_rpf.tsv.gz

about 1 month 692 MB

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SRX11780890.psite.tsv.gz

about 1 month 28.9 MB

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SRX11780890.psite_offset.tsv.gz

about 1 month 397 B

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null_candidate_orfs.tsv

about 1 month 352 MB

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