nf-core/riboseq

Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.

Launch version 1.2.0 https://github.com/nf-core/riboseq

Name Last Modified Size

alignment/ genome/ multiqc/ offset_plot/ orf_predictions/ other/ pipeline_info/ preprocessing/ quantification/ riboseq_qc/ ribowaltz_qc/ translational_efficiency/

SRX11780885.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780885.cds_coverage_psite.tsv.gz

2 months 610 kB

Copy file URL

Copy S3 URL

SRX11780885.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 602 kB

Copy file URL

Copy S3 URL

SRX11780885.codon_coverage_psite.tsv.gz

2 months 688 MB

Copy file URL

Copy S3 URL

SRX11780885.codon_coverage_rpf.tsv.gz

2 months 694 MB

Copy file URL

Copy S3 URL

SRX11780885.psite.tsv.gz

2 months 49.4 MB

Copy file URL

Copy S3 URL

SRX11780885.psite_offset.tsv.gz

2 months 424 B

Copy file URL

Copy S3 URL

SRX11780886.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780886.cds_coverage_psite.tsv.gz

2 months 609 kB

Copy file URL

Copy S3 URL

SRX11780886.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 600 kB

Copy file URL

Copy S3 URL

SRX11780886.codon_coverage_psite.tsv.gz

2 months 688 MB

Copy file URL

Copy S3 URL

SRX11780886.codon_coverage_rpf.tsv.gz

2 months 694 MB

Copy file URL

Copy S3 URL

SRX11780886.psite.tsv.gz

2 months 47.7 MB

Copy file URL

Copy S3 URL

SRX11780886.psite_offset.tsv.gz

2 months 426 B

Copy file URL

Copy S3 URL

SRX11780887.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780887.cds_coverage_psite.tsv.gz

2 months 611 kB

Copy file URL

Copy S3 URL

SRX11780887.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 602 kB

Copy file URL

Copy S3 URL

SRX11780887.codon_coverage_psite.tsv.gz

2 months 688 MB

Copy file URL

Copy S3 URL

SRX11780887.codon_coverage_rpf.tsv.gz

2 months 694 MB

Copy file URL

Copy S3 URL

SRX11780887.psite.tsv.gz

2 months 47.7 MB

Copy file URL

Copy S3 URL

SRX11780887.psite_offset.tsv.gz

2 months 418 B

Copy file URL

Copy S3 URL

SRX11780888.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780888.cds_coverage_psite.tsv.gz

2 months 613 kB

Copy file URL

Copy S3 URL

SRX11780888.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 604 kB

Copy file URL

Copy S3 URL

SRX11780888.codon_coverage_psite.tsv.gz

2 months 687 MB

Copy file URL

Copy S3 URL

SRX11780888.codon_coverage_rpf.tsv.gz

2 months 693 MB

Copy file URL

Copy S3 URL

SRX11780888.psite.tsv.gz

2 months 33.3 MB

Copy file URL

Copy S3 URL

SRX11780888.psite_offset.tsv.gz

2 months 400 B

Copy file URL

Copy S3 URL

SRX11780889.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780889.cds_coverage_psite.tsv.gz

2 months 609 kB

Copy file URL

Copy S3 URL

SRX11780889.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 600 kB

Copy file URL

Copy S3 URL

SRX11780889.codon_coverage_psite.tsv.gz

2 months 687 MB

Copy file URL

Copy S3 URL

SRX11780889.codon_coverage_rpf.tsv.gz

2 months 692 MB

Copy file URL

Copy S3 URL

SRX11780889.psite.tsv.gz

2 months 31.8 MB

Copy file URL

Copy S3 URL

SRX11780889.psite_offset.tsv.gz

2 months 405 B

Copy file URL

Copy S3 URL

SRX11780890.best_offset.txt

2 months 50 B

Copy file URL

Copy S3 URL

SRX11780890.cds_coverage_psite.tsv.gz

2 months 609 kB

Copy file URL

Copy S3 URL

SRX11780890.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

2 months 600 kB

Copy file URL

Copy S3 URL

SRX11780890.codon_coverage_psite.tsv.gz

2 months 687 MB

Copy file URL

Copy S3 URL

SRX11780890.codon_coverage_rpf.tsv.gz

2 months 692 MB

Copy file URL

Copy S3 URL

SRX11780890.psite.tsv.gz

2 months 28.9 MB

Copy file URL

Copy S3 URL

SRX11780890.psite_offset.tsv.gz

2 months 397 B

Copy file URL

Copy S3 URL

null_candidate_orfs.tsv

2 months 352 MB

Copy file URL

Copy S3 URL