nf-core/riboseq

Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.

Launch version 1.2.0 https://github.com/nf-core/riboseq

Name Last Modified Size

alignment/ genome/ multiqc/ offset_plot/ orf_predictions/ other/ pipeline_info/ preprocessing/ quantification/ riboseq_qc/ ribowaltz_qc/ translational_efficiency/

SRX11780885.best_offset.txt

about 6 hours 50 B

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SRX11780885.cds_coverage_psite.tsv.gz

about 6 hours 610 kB

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SRX11780885.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 602 kB

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SRX11780885.codon_coverage_psite.tsv.gz

about 6 hours 688 MB

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SRX11780885.codon_coverage_rpf.tsv.gz

about 6 hours 694 MB

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SRX11780885.psite.tsv.gz

about 6 hours 49.4 MB

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SRX11780885.psite_offset.tsv.gz

about 6 hours 424 B

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SRX11780886.best_offset.txt

about 6 hours 50 B

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SRX11780886.cds_coverage_psite.tsv.gz

about 6 hours 609 kB

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SRX11780886.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 600 kB

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SRX11780886.codon_coverage_psite.tsv.gz

about 6 hours 688 MB

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SRX11780886.codon_coverage_rpf.tsv.gz

about 6 hours 694 MB

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SRX11780886.psite.tsv.gz

about 6 hours 47.7 MB

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SRX11780886.psite_offset.tsv.gz

about 6 hours 426 B

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SRX11780887.best_offset.txt

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SRX11780887.cds_coverage_psite.tsv.gz

about 6 hours 611 kB

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SRX11780887.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 602 kB

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SRX11780887.codon_coverage_psite.tsv.gz

about 6 hours 688 MB

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SRX11780887.codon_coverage_rpf.tsv.gz

about 6 hours 694 MB

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SRX11780887.psite.tsv.gz

about 6 hours 47.7 MB

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SRX11780887.psite_offset.tsv.gz

about 6 hours 418 B

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SRX11780888.best_offset.txt

about 6 hours 50 B

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SRX11780888.cds_coverage_psite.tsv.gz

about 6 hours 613 kB

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SRX11780888.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 604 kB

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SRX11780888.codon_coverage_psite.tsv.gz

about 6 hours 687 MB

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SRX11780888.codon_coverage_rpf.tsv.gz

about 6 hours 693 MB

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SRX11780888.psite.tsv.gz

about 6 hours 33.3 MB

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SRX11780888.psite_offset.tsv.gz

about 6 hours 400 B

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SRX11780889.best_offset.txt

about 6 hours 50 B

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SRX11780889.cds_coverage_psite.tsv.gz

about 6 hours 609 kB

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SRX11780889.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 600 kB

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SRX11780889.codon_coverage_psite.tsv.gz

about 6 hours 687 MB

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SRX11780889.codon_coverage_rpf.tsv.gz

about 6 hours 692 MB

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SRX11780889.psite.tsv.gz

about 6 hours 31.8 MB

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SRX11780889.psite_offset.tsv.gz

about 6 hours 405 B

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SRX11780890.best_offset.txt

about 6 hours 50 B

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SRX11780890.cds_coverage_psite.tsv.gz

about 6 hours 609 kB

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SRX11780890.cds_plus42nt_minus27nt_coverage_psite.tsv.gz

about 6 hours 600 kB

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SRX11780890.codon_coverage_psite.tsv.gz

about 6 hours 687 MB

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SRX11780890.codon_coverage_rpf.tsv.gz

about 6 hours 692 MB

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SRX11780890.psite.tsv.gz

about 6 hours 28.9 MB

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SRX11780890.psite_offset.tsv.gz

about 6 hours 397 B

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null_candidate_orfs.tsv

about 9 hours 352 MB

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