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nf-core/rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

rnarna-seq
These pages are for an old version of the pipeline (1.1). The latest stable release is 3.18.0 .
Launch version 1.1 https://github.com/nf-core/rnaseq
  • Introduction
  • Usage
  • Output
  • Results
  • Releases
    • 3.18.0
    • 3.17.0
    • 3.16.1
    • 3.16.0
    • 3.15.1
    • 3.15.0
    • 3.14.0
    • 3.13.2
    • 3.13.1
    • 3.13.0
    • 3.12.0
    • 3.11.2
    • 3.11.1
    • 3.11.0
    • 3.10.1
    • 3.10
    • 3.9
    • 3.8.1
    • 3.8
    • 3.7
    • 3.6
    • 3.5
    • 3.4
    • 3.3
    • 3.2
    • 3.1
    • 3.0
    • 2.0
    • 1.4.2
    • 1.4.1
    • 1.4
    • 1.3
    • 1.2
    • 1.1
    • 1.0
    • dev
Introduction Usage Output Results Releases
  • 3.18.0
  • 3.17.0
  • 3.16.1
  • 3.16.0
  • 3.15.1
  • 3.15.0
  • 3.14.0
  • 3.13.2
  • 3.13.1
  • 3.13.0
  • 3.12.0
  • 3.11.2
  • 3.11.1
  • 3.11.0
  • 3.10.1
  • 3.10
  • 3.9
  • 3.8.1
  • 3.8
  • 3.7
  • 3.6
  • 3.5
  • 3.4
  • 3.3
  • 3.2
  • 3.1
  • 3.0
  • 2.0
  • 1.4.2
  • 1.4.1
  • 1.4
  • 1.3
  • 1.2
  • 1.1
  • 1.0
  • dev

No AWS results found!

It seems like there is not yet any AWS results for this version of rnaseq. Please check newer releases of this pipeline.

Making awesome workflows since 2018.

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See the source code for this website on GitHub:
https://github.com/nf-core/website