A subworkflow for filtering differential abundance results
ch_input
Channel with input data for differential analysis
ch_samplesheet
Channel with sample information
ch_transcript_lengths
Channel with transcript length information
ch_control_features
Channel with control features information
ch_contrasts
Channel with contrast information
results_genewise
Channel containing unfiltered differential analysis results
results_genewise_filtered
Channel containing filtered differential analysis results
adjacency
Channel containing the adjacency matrix suited for downstream graph-based functional analysis
normalised_matrix
Channel containing normalised count matrix
variance_stabilised_matrix
Channel containing variance stabilised count matrix (DESeq2 only)
model
Channel containing statistical model object from differential analysis
size_factors
Channel containing DESeq2 size factors (DESeq2 only)
dispersion_plot
Channel containing DESeq2 dispersion plots (DESeq2 only)
md_plot
Channel containing limma mean difference plots (limma only)
rdata
Channel containing serialised R objects from differential analysis
session_info
Channel containing R session information
versions
Channel containing software versions file
