bedgraph_bedclip_bedgraphtobigwig

Convert bedgraph to bigwig with clip

bedgraphbigwigclipconversion

https://github.com/nf-core/modules/[...]/subworkflows/nf-core/bedgraph_bedclip_bedgraphtobigwig

Description

Convert bedgraph to bigwig with clip

Input

name:type

description

pattern

`bedgraph :file`

bedGraph file which should be converted

*.bedGraph

`sizes :file`

File with chromosome sizes

*.sizes

Output

name:type

description

pattern

`bigwig :file`

bigWig coverage file relative to genes on the input file

.bigWig

`bedgraph :file`

bedGraph file after clipping

*.bedGraph

`versions :file`

File containing software versions

versions.yml