nf-core/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
ampliconarticassemblycovid-19covid19illuminalong-read-sequencingmetagenomicsnanoporeontoxford-nanoporesars-cov-2variant-callingviralvirus
These pages are for an old version of the pipeline (
Launch version 2.1 https://github.com/nf-core/viralrecon 2.1). The latest
stable release is
2.6.0
.