• Home
  • Pipelines
  • Resources
    • Configs & tools
    • Shared Configs
    • Tools

    • Components
    • Modules
    • Subworkflows
  • Docs
  • Events
    • bytesize
    • hackathon
    • talk
    • training
    • All events
  • About
    • Community
    • About nf-core
    • Governance
    • Contributors
    • Marketing
    • Code of conduct

    • Initiatives
    • Mentorships
    • Publications
    • Statistics

    • Join nf-core
  • Select theme
  • Light
  • Dark
  • System

  • Select theme
  • Light
  • Dark
  • System
Join nf-core Join nf-core

nf-core/bamtofastq

Converts bam or cram files to fastq format and does quality control.

bamtofastqconversioncramtofastq
These pages are for an old version of the pipeline (1.2.0). The latest stable release is 2.0.0 .
Launch version 1.2.0https://github.com/nf-core/bamtofastq
  • Introduction
  • Usage
  • Output
  • Results
  • Releases
    • 2.0.0
    • 1.2.0
    • 1.1.0
    • 1.0.0
    • dev
IntroductionUsageOutputResultsReleases
  • 2.0.0
  • 1.2.0
  • 1.1.0
  • 1.0.0
  • dev

No nextflow_schema.json file found!

It seems like there is no nextflow_schema.json file with parameters defined for this version of the pipeline. Try a newer version.

Making awesome workflows since 2018.

Supported by:

+++
See the source code for this website on GitHub:
https://github.com/nf-core/website