These pages are for an old version of the pipeline (
1.0
). The latest
stable release is
1.1.1
.
This pipeline uses DSL1. It will not work with Nextflow versions after
Launch version 1.0 https://github.com/nf-core/coproid 22.10.6
.
Learn more.
Introduction
CoproID helps you to identify the “true maker” of a sequenced Coprolite by checking the microbiome composition and the endogenous DNA.
The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker containers making installation trivial and results highly reproducible.
Credits
nf-core/coproid was originally written by Maxime Borry.