nf-core/crisprvar

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Introduction

The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker / singularity containers making installation trivial and results highly reproducible.

Documentation

The nf-core/crisprvar pipeline comes with documentation about the pipeline, found in the docs/ directory:

1. Installation
2. Pipeline configuration
   * Local installation
   * Adding your own system
3. Running the pipeline
4. Output and how to interpret the results
5. Troubleshooting