nf-core/cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
cutandruncutandrun-seqcutandtagcutandtag-seq
These pages are for an old version of the pipeline (
Launch version 3.2.1 https://github.com/nf-core/cutandrun 3.2.1). The latest
stable release is
3.2.2
.