nf-core/denovotranscript

A pipeline for de novo transcriptome assembly of paired-end short reads from bulk RNA-seq

denovo-assemblyrna-seqtranscriptome

Launch version 1.2.1 https://github.com/nf-core/denovotranscript

NameLast ModifiedSize

Juvenile_K1/Juvenile_K2/Juvenile_K3/all_assembled-arthropoda_odb10-busco/all_assembled.okay/all_assembled_output/dropset/fastqc/logs/multiqc/okayset/pipeline_info/puerulus_H4/puerulus_H5/puerulus_H6/rnaspades/salmon/

Juvenile_K1.fastp.html

7 months474 kB

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Juvenile_K1.fastp.json

7 months122 kB

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Juvenile_K1.fastp.log

7 months1.32 kB

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Juvenile_K1_1.fastp.fastq.gz

7 months5.98 MB

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Juvenile_K1_2.fastp.fastq.gz

7 months6.74 MB

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Juvenile_K1_lib_format_counts.json

7 months570 B

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Juvenile_K1_meta_info.json

7 months1.83 kB

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Juvenile_K2.fastp.html

7 months474 kB

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Juvenile_K2.fastp.json

7 months123 kB

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Juvenile_K2.fastp.log

7 months1.32 kB

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Juvenile_K2_1.fastp.fastq.gz

7 months5.91 MB

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Juvenile_K2_2.fastp.fastq.gz

7 months6.78 MB

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Juvenile_K2_lib_format_counts.json

7 months570 B

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Juvenile_K2_meta_info.json

7 months1.83 kB

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Juvenile_K3.fastp.html

7 months474 kB

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Juvenile_K3.fastp.json

7 months123 kB

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Juvenile_K3.fastp.log

7 months1.32 kB

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Juvenile_K3_1.fastp.fastq.gz

7 months5.93 MB

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Juvenile_K3_2.fastp.fastq.gz

7 months6.76 MB

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Juvenile_K3_lib_format_counts.json

7 months570 B

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Juvenile_K3_meta_info.json

7 months1.83 kB

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all_assembled-arthropoda_odb10-busco.batch_summary.txt

7 months147 B

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all_assembled.fa.gz

7 months5.35 MB

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all_assembled.tx2gene.tsv

7 months352 kB

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7 months1.18 kB

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pooled_reads.fa.gz

7 months2.42 MB

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pooled_reads.log

7 months709 kB

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pooled_reads_1.merged.fastq.gz

7 months36.3 MB

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pooled_reads_2.merged.fastq.gz

7 months40.2 MB

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puerulus_H4.fastp.html

7 months473 kB

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puerulus_H4.fastp.json

7 months122 kB

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puerulus_H4.fastp.log

7 months1.32 kB

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puerulus_H4_1.fastp.fastq.gz

7 months6.22 MB

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puerulus_H4_2.fastp.fastq.gz

7 months6.57 MB

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puerulus_H4_lib_format_counts.json

7 months570 B

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puerulus_H4_meta_info.json

7 months1.83 kB

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puerulus_H5.fastp.html

7 months473 kB

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puerulus_H5.fastp.json

7 months122 kB

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puerulus_H5.fastp.log

7 months1.32 kB

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puerulus_H5_1.fastp.fastq.gz

7 months6.24 MB

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puerulus_H5_2.fastp.fastq.gz

7 months6.61 MB

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puerulus_H5_lib_format_counts.json

7 months569 B

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puerulus_H5_meta_info.json

7 months1.83 kB

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puerulus_H6.fastp.html

7 months473 kB

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puerulus_H6.fastp.json

7 months122 kB

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puerulus_H6.fastp.log

7 months1.32 kB

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puerulus_H6_1.fastp.fastq.gz

7 months5.96 MB

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puerulus_H6_2.fastp.fastq.gz

7 months6.77 MB

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puerulus_H6_lib_format_counts.json

7 months570 B

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puerulus_H6_meta_info.json

7 months1.83 kB

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short_report.pdf

7 months18.2 kB

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short_report.tex

7 months1.69 kB

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short_report.tsv

7 months104 B

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short_report.txt

7 months361 B

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short_summary.specific.arthropoda_odb10.all_assembled.okay.mrna.json

7 months2.9 kB

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short_summary.specific.arthropoda_odb10.all_assembled.okay.mrna.txt

7 months858 B

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7 months5.59 kB

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