modules/galah
Cluster genome FASTA files by average nucleotide identity
genomicsclustergenomemetagenomics
Input
name:type
description
pattern
(optional) A summary TSV from either CheckM [https://nf-co.re/modules/checkm_lineagewf],
CheckM2 [https://nf-co.re/modules/checkm2_predict/], or a CSV
in drep-style format [https://github.com/MrOlm/drep] with three columnns,
genome,completeness,contamination. In both cases the first column should contain the
names of the input genome files, minus the last file extension
(i.e. if the genome is gzipped, the genome name should
retain the .fasta extension).
*.{csv,tsv}