colours a phylogeny with placement densities
meta
Groovy Map containing sample information e.g. [ id:‘test’ ]
jplace
jplace file output from phylogenetic placement, e.g. EPA-NG, gzipped or not
*.{jplace,jplace.gz}
versions
File containing software versions
versions.yml
newick
phylogenetic tree file in newick format
*.newick
nexus
coloured phylogenetic tree file in nexus format
*.nexus
phyloxml
coloured phylogenetic tree file in phyloxml format
*.phyloxml
svg
coloured phylogenetic tree file in svg format
*.svg
colours
colours used in plot
*.colours.txt
log
log file from the run
*.log
Genesis Applications for Phylogenetic Placement Analysis
