nf-core/ampliseq
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Amplicon sequencing analysis workflow using DADA2 and QIIME2

16s18samplicon-sequencingednailluminaiontorrentitsmetabarcodingmetagenomicsmetataxonomicsmicrobiomepacbioqiime2rrnataxonomic-classificationtaxonomic-profiling

Launch version 2.17.0 https://github.com/nf-core/ampliseq

run with

See the docs on how to configure the Seqera Platform CLI.

video introduction

subscribers

153

stars

243

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19

last release

about 11 hours ago

last update

about 11 hours ago

included modules

clustalo_align cutadapt epang_place epang_split fastqc and 18 more modules

included subworkflows

fasta_hmmsearch_rank_fastas fasta_newick_epang_gappa utils_nextflow_pipeline utils_nfcore_pipeline utils_nfschema_plugin

contributors

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