Run hmmsearch and output separate fasta files for top scoring hits to each profile
ch_hmms
The input channel containing hmm profiles Structure: [ val(meta), path(hmm) ]
*.{hmm}
ch_fasta
The input channel containing sequences to be searched and ranked
hmmrank
Channel containing the TSV file from ranking hmmsearch hits Structure: [ val(meta), path(hmmrank) ]
*.hmmrank.tsv.gz
bai
Channel containing subsets of sequences Structure: [ val(meta), path(fasta) ]
*.fa.gz