Taxonomic meta-omics profiling using universal marker genes
Input
Name (Type)
Description
Pattern
input (file)
List of output files (more than one) from motus profile,
or a single directory containing motus output files.
db (directory)
mOTUs database downloaded by motus downloadDB
pattern: "db_mOTU/"
profile_version_yml (file)
A single versions.yml file output from motus/profile. motus/merge cannot reconstruct
this itself without having the motus database present and configured with the tool
so here we take it from what is already reported by the upstream module.
versions.yml
Output
Name (Type)
Description
Pattern
versions (file)
File containing software versions
versions.yml
txt (file)
OTU table in txt format, if BIOM format not requested
*.txt
biom (file)
OTU table in biom format, if BIOM format requested
