nf-core/neutronstar

De novo assembly pipeline for 10X linked-reads using Supernova

10x-genomics10xgenomicsdenovo-assemblygenome-assemblylinked-readssupernova

This pipeline uses DSL1. It will not work with Nextflow versions after 22.10.6. Learn more.

Launch version 1.0.0 https://github.com/nf-core/neutronstar

Version history

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Initial release of nf-core/neutronstar, created with the nf-core template.

Added mock test data to be able to run Travis tests
More documentation
Streamlined a bit how parameters work / added sensible defaults
Use and harmonize code with nf-core template system
Numerous other smaller changes under the hood