A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.
Define where the pipeline should find input data and save output data.
Choose the data types that should be simulated by the pipeline.
Options for simulating amplicon sequencing reads.
Options for simulating target capture sequencing reads.
Options for simulating metagenomic sequencing reads.
Options for simulating wholegenome sequencing reads.
Reference genome related files and options required for the workflow.
Parameters used to describe centralised config profiles. These should not be edited.
Set the top limit for requested resources for any single job.
Less common options for the pipeline, typically set in a config file.