What’s Changed

• Restart dev from a new template by @maxulysse in #2
• Restart dev by @maxulysse in #3
• Initialise testing and base template functionality by @pinin4fjords in #4
• Fix lint by @maxulysse in #5
• Important! Template update for nf-core/tools v2.11.1 by @nf-core-bot in #7
• Preprocessing from rnaseq by @pinin4fjords in #8
• Take rnaseq preprocessing workflow from nf-core by @pinin4fjords in #10
• Important! Template update for nf-core/tools v2.12 by @nf-core-bot in #9
• Add alignment via STAR + postprocessing by @pinin4fjords in #12
• Nf core template merge 2.13 (manual) by @pinin4fjords in #32
• Fix order of preprocessing steps by @pinin4fjords in #34
• Sortmerna: index once by @pinin4fjords in #35
• Bump bbsplit module to prevent index overwrites by @pinin4fjords in #36
• Important! Template update for nf-core/tools v2.13.1 by @nf-core-bot in #38
• Integrate Ribo-TISH by @pinin4fjords in #39
• Ribotricer orf prediction by @pinin4fjords in #40
• Amend credits statement by @FelixKrueger in #41
• Add alignment based quantification with Salmon by @pinin4fjords in #42
• Add translational efficiency analysis with anota2seq by @pinin4fjords in #43
• Fix lack of fastqc in multiqc report by @pinin4fjords in #44
• Update CI from rnaseq, strip unused rnaseq components by @pinin4fjords in #45
• Prerelease changes v1.0.0 by @pinin4fjords in #46
• Remove stub option from download in CI by @pinin4fjords in #48
• Fix CI by @pinin4fjords in #49
• changed logos to the custom w/ ribosome by @JackCurragh in #51
• updated changelog by @JackCurragh in #52
• V1.0.0 release review fixes by @pinin4fjords in #50
• Dev -> master for v1.0.0 by @pinin4fjords in #47

New Contributors

• @maxulysse made their first contribution in #2
• @pinin4fjords made their first contribution in #4
• @nf-core-bot made their first contribution in #7
• @FelixKrueger made their first contribution in #41
• @JackCurragh made their first contribution in #51

Full Changelog: https://github.com/nf-core/riboseq/commits/1.0.0