nf-core/scrnaseq
Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection
10x-genomics10xgenomicsalevinbustoolscellrangerkallistorna-seqsingle-cellstar-solo
These pages are for an old version of the pipeline (
Launch version 2.1.0 https://github.com/nf-core/scrnaseq 2.1.0). The latest
stable release is
3.0.0
.