nf-core/ribomsqc: Changelog

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

v1.0.0 - 2026-03-11

Added

• #27 - Added new quantification markers to XIC line plots for enhanced interpretability
• #27 - Accumulate TSV export with overwrite toggle
• #27 - Add MS level to section_name in MultiQC JSON output
• #27 - Enhance XIC plots with FWHM and PPP threshold visualization
• #27 - Add support for —analyte_name all to process all TSV entries
• #27 - Support for MultiQC as module to aggregate results.
• #27 - Custom MSNBASEXIC module to extract and plot XICs.
• #27 - Support for ThermoRawFileParser module to convert RAW to mzML.
• #27 - Initial implementation of the pipeline.

Changed

• #27 - Remove unused ch_mqc_jsons_previous logic from workflow
• #27 - Bump MultiQC from 1.28 to 1.33
• #27 - Improved logging clarity and enhanced plot aesthetics
• #27 - Corrected MS2 peak extraction logic with accurate precursor matching
• #27 - Refined internal logic of the XIC extraction algorithm

Fixed

• #27 - Resolved issue causing missing JSON output entries for certain analytes
• #27 - Harmonized XIC plot styling, layout and retention time interval handling
• #27 - Preserve MS level in mergejsons
• #27 - Fixed FWHM interpolation logic

Dependencies