nf-core/tools API documentation
Automated documentation for nf-core/tools (1.13.3
)
template_strings
PipelineLint.template_strings()
Check for template placeholders.
The nf-core create
pipeline template uses
Jinja behind the scenes.
This lint test fails if any Jinja template variables such as
{{ pipeline_name }}
are found in your pipeline code.
Finding a placeholder like this means that something was probably copied and pasted from the template without being properly rendered for your pipeline.
This test ignores any double-brackets prefixed with a dollar sign, such as
${{ secrets.AWS_ACCESS_KEY_ID }}
as these placeholders are used in GitHub Actions workflows.