Special Interest Groups
nf-core Special Interest Groups are groups of community members who are interested in a particular aspect of nf-core, such as pipelines, tools, or community engagement.
To find out more about Special Interest Groups, read the announcement blog post.
The Animal Genomics Special Interest Group is a community of researchers and practitioners interested in the application of genomics to animal breeding and genetics.
Pipelines:
atacseqchipseqhicisoseqmethylseqnanoseqrnaseqrnavarsareksmrnaseqGroup leads:
The special interest group dedicated to cancer genomics and everything related to it.
Pipelines:
oncoanalyserrnafusionsarektumourevoGroup leads:
The Core Facilities Special Interest Group facilitates discussions and knowledge sharing for professionals working in Bioinformatics Core Facilities and HPC administration teams within research institutes and groups.
Pipelines:
ampliseqatacseqchipseqcutandrunrnaseqsarekscrnaseqsmrnaseqGroup leads:
Community of researchers promoting the inclusion of Nextflow into academic curricula, developing open-source educational materials
Pipelines:
hgtseqrarediseasernaseqsarekGroup leads:
The Immunology Special Interest Group brings together members of the nf-core community who are working on immunology-related research.
Pipelines:
airrflowepitopepredictionhlatypingmetapepmhcquantrnaseqsarekscrnaseqGroup leads:
The special interest group Industry adoption will aim to improve nf-core to make it easy to adopt its pipelines in an industry setting. Mixing of open-source and proprietary code.
Pipelines:
rnaseqsarekGroup leads:
Community of researchers investigating biological community composition and dynamics using metagenomic, metatranscriptomic, and metaproteomic approaches.
Pipelines:
ampliseqcreatetaxdbdifferentialabundanceeagerfuncscanmagmagmapmetatdenovophageannotatorphyloplacernaseqtaxprofilerGroup leads:
Community of researchers with a shared interest in pipeline validation & qualification for clinical applications
Pipelines:
differentialabundancenanostringrarediseasernafusionrnaseqsareksmrnaseqspatialvitaxprofilerGroup leads:
