Newsletter - March 2022
nf-core community newsletter for March 2022
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1 pipeline release, 7 upcoming events.
 1st March 2022 |
Pipeline releases
Upcoming events
| BytesizeBytesize 35: Troubleshooting a failed pipeline | 1 Mar 2022 |
| <p>Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden</p> | |
| BytesizeBytesize 36: Customising your MultiQC reports | 8 Mar 2022 |
| <p>Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden</p> | |
| BytesizeBytesize 37: Gather Town | 15 Mar 2022 |
| <p>James A. Fellows Yates - Leibniz-HKI / MPI-EVA</p> | |
| HackathonHackathon - March 2022 | 16 Mar 2022 – 18 Mar 2022 |
| <p>A virtual online hackathon to develop nf-core together</p> | |
| BytesizeBytesize 40: Software packaging | 5 Apr 2022 |
| <p>Alexander Peltzer - Boehringer Ingelheim Pharma GmbH & Co. KG, Germany</p> | |
| TalkEuroFAANG Training Workshop | 7 Apr 2022 |
| <p>Best practice for preparing pipelines in nf-core and recording pipeline usage in FAANG submissions</p> | |
| BytesizeBytesize 41: Code linting tools | 12 Apr 2022 |
| <p>Phil Ewels - National Genomics Infrastructure / SciLifeLab, Sweden</p> | |
In case you missed it
New pipelines & proposals
nf-core/genomeannotatorNew repo
Pipeline for the identification of (coding) gene structures in draft genomes.
Pipeline for the identification of (coding) gene structures in draft genomes.
nf-core/spatialviNew repo
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
nf-core/taxprofilerNew repo
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
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