main_nf

ModuleLint.main_nf(module)

Lint a main.nf module file

Can also be used to lint local module files, in which case failures will be reported as warnings.

The test checks for the following:

  • Software versions and containers are valid
  • The module has a process label and it is among the standard ones.
  • If a meta map is defined as one of the modules inputs it should be defined as one of the outputs, and be correctly configured in the saveAs function.
  • The module script section should contain definitions of software and prefix