nf_core.bump_version

Bumps the version number in all appropriate files for a nf-core pipeline.

nf_core.bump_version.bump_nextflow_version(pipeline_obj:Pipeline, new_version: str)

Bumps the required Nextflow version number of a pipeline.

• Parameters:
  • pipeline_obj (nf_core.utils.Pipeline) – A Pipeline object that holds information about the pipeline contents and build files.
  • new_version (str) – The new version tag for the required Nextflow version.

nf_core.bump_version.bump_pipeline_version(pipeline_obj:Pipeline, new_version: str)

Bumps a pipeline version number.

• Parameters:
  • pipeline_obj (nf_core.utils.Pipeline) – A Pipeline object that holds information about the pipeline contents and build files.
  • new_version (str) – The new version tag for the pipeline. Semantic versioning only.

nf_core.bump_version.update_file_version(filename: str | Path, pipeline_obj:Pipeline, patterns: List[Tuple[str, str]])

Updates the version number in a requested file.

• Parameters:
  • filename (str) – File to scan.
  • pipeline_obj (nf_core.lint.PipelineLint) – A PipelineLint object that holds information about the pipeline contents and build files.
  • pattern (str) – Regex pattern to apply.
• Raises: ValueError**,** if the version number cannot be found. –