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nf-core/mag
Edit

Assembly and binning of metagenomes

annotationassemblybinninglong-read-sequencingmetagenomesmetagenomicsnanoporenanopore-sequencing
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/mag
  • Introduction
  • Usage
  • Parameters
  • Output
  • Releases
    • 5.4.0
    • 5.3.0
    • 5.2.0
    • 5.1.0
    • 5.0.0
    • 4.0.0
    • 3.4.0
    • 3.3.1
    • 3.3.0
    • 3.2.1
    • 3.2.0
    • 3.1.0
    • 3.0.3
    • 3.0.2
    • 3.0.1
    • 3.0.0
    • 2.5.4
    • 2.5.3
    • 2.5.2
    • 2.5.1
    • 2.5.0
    • 2.4.0
    • 2.3.2
    • 2.3.1
    • 2.3.0
    • 2.2.1
    • 2.2.0
    • 2.1.1
    • 2.1.0
    • 2.0.0
    • 1.2.0
    • 1.1.2
    • 1.1.1
    • 1.1.0
    • 1.0.0
    • dev
Introduction Usage Parameters Output Releases
  • 5.4.0
  • 5.3.0
  • 5.2.0
  • 5.1.0
  • 5.0.0
  • 4.0.0
  • 3.4.0
  • 3.3.1
  • 3.3.0
  • 3.2.1
  • 3.2.0
  • 3.1.0
  • 3.0.3
  • 3.0.2
  • 3.0.1
  • 3.0.0
  • 2.5.4
  • 2.5.3
  • 2.5.2
  • 2.5.1
  • 2.5.0
  • 2.4.0
  • 2.3.2
  • 2.3.1
  • 2.3.0
  • 2.2.1
  • 2.2.0
  • 2.1.1
  • 2.1.0
  • 2.0.0
  • 1.2.0
  • 1.1.2
  • 1.1.1
  • 1.1.0
  • 1.0.0
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
video introduction
Play
subscribers
163
stars
279
open issues
88
open PRs
8
last release
about 1 month ago
last update
about 1 month ago
included modules
adapterremovalalebbmap_bbnormbcftools_consensusbcftools_index and 64 more modules
included subworkflows
fasta_binning_concoctutils_nextflow_pipelineutils_nfcore_pipelineutils_nfschema_plugin
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